Targeted sequencing of Hypocalyptus sophoroides - SRA

SRX22451897: Targeted sequencing of Hypocalyptus sophoroides
1 ILLUMINA (Illumina HiSeq 3000) run: 406,071 spots, 121.8M bases, 45Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 5

PRJNA1022023 • SRP471007 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Hypocalyptus sophoroides

SAMN37579650 • SRS19465928 • All experiments • All runs

Organism: Hypocalyptus sophoroides

Library:

Name: 55e53a60-2084-4c05-ba73-f7e20ffa2ef9

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 406,071 spots, 121.8M bases, 45Mb

Run	# of Spots	# of Bases	Size	Published
SRR26753090	406,071	121.8M	45Mb	2023-11-09

ID:: 30437567

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity